On this page
SGCD
sarcoglycan delta
The SGCD gene provides instructions for making delta-sarcoglycan, a protein essential for maintaining the structural integrity of muscle cells. The SGCD gene encodes the delta-sarcoglycan protein, a key part of the sarcoglycan complex within muscle cell membranes.
SGCD is located on the long (q) arm of chromosome 5, at band 5q33.2-q33.3. Arm ratio per GRCh38 - banding schematic.
Explore chromosome 5 in the library →Available at Jeen Health
Clinical tests that include this
Overview
The SGCD gene, also known as sarcoglycan delta, plays a crucial role in muscle function. It provides the genetic blueprint for a protein called delta-sarcoglycan, which is an integral component of the sarcoglycan protein complex. This complex is located in the membrane surrounding muscle cells, where it contributes to muscle structure and stability.
Pathogenic variants in the SGCD gene are associated with inherited muscle conditions, particularly limb-girdle muscular dystrophy. Understanding the SGCD gene's function is important for comprehending the mechanisms underlying these muscle disorders.
What the gene does
The SGCD gene's primary function is to direct the production of delta-sarcoglycan, one of the four core components of the sarcoglycan protein complex (alpha, beta, gamma, and delta). This complex is situated in the sarcolemma, which is the cell membrane of muscle fibres. Within this membrane, the sarcoglycan complex is closely associated with the larger dystrophin-glycoprotein complex.
The main role of the sarcoglycan complex is to help maintain the structural integrity of muscle tissue. It achieves this by binding to and stabilising the dystrophin complex. The dystrophin complex acts as a crucial link, connecting the internal structural framework of a muscle cell (cytoskeleton) to the external network of proteins and molecules (extracellular matrix). This connection helps strengthen muscle fibres and protects them from injury that can occur during the repeated cycles of muscle contraction and relaxation.
Video: Genetics 101
Chromosome location
The SGCD gene is located on the long arm of chromosome 5, specifically at position 5q33.2-q33.3. This region of the human genome contains various genes, and the precise localisation of SGCD helps in understanding its genetic context and potential interactions with neighbouring genes.
Protein structure
The delta-sarcoglycan protein, encoded by the SGCD gene, consists of 289 amino acids. Domain architecture has not been experimentally characterised in detail for this protein.
Key variants
Variants within the SGCD gene can alter the function or production of the delta-sarcoglycan protein. These genetic changes can range from single nucleotide substitutions to larger deletions or insertions. Such alterations may impair the protein's ability to properly integrate into the sarcoglycan complex or to perform its stabilising role within muscle cell membranes, leading to muscle dysfunction.
Sample of pathogenic variants
10 pathogenic / likely-pathogenic variants from ClinVar, ranked by review status (expert-panel-reviewed first). This is a sample; recurrent founder variants in a specific population may not appear here - see the full ClinVar listing via the link above.
| Variant (HGVS) | Protein change | Classification | Evidence | Associated condition |
|---|---|---|---|---|
c.289C>T | p.Arg97Ter | Pathogenic | ★★★☆ | Autosomal recessive limb-girdle muscular dystrophy |
c.493C>T | p.Arg165Ter | Pathogenic | ★★★☆ | Autosomal recessive limb-girdle muscular dystrophy |
c.10C>T | p.Gln4Ter | Pathogenic/Likely pathogenic | ★★☆☆ | Autosomal recessive limb-girdle muscular dystrophy type 2F |
c.133_172dup | p.Lys58fs | Pathogenic | ★★☆☆ | Autosomal recessive limb-girdle muscular dystrophy type 2F |
c.248_249del | p.Asp82_Ser83insTer | Pathogenic | ★★☆☆ | Autosomal recessive limb-girdle muscular dystrophy type 2F |
c.354_358del | p.Thr119fs | Pathogenic | ★★☆☆ | Dilated cardiomyopathy 1L |
c.390del | p.Ala131fs | Pathogenic/Likely pathogenic | ★★☆☆ | Neuromuscular disease |
c.441dup | p.Leu148fs | Pathogenic/Likely pathogenic | ★★☆☆ | Autosomal recessive limb-girdle muscular dystrophy type 2F |
c.65dup | p.Tyr23fs | Pathogenic | ★★☆☆ | Autosomal recessive limb-girdle muscular dystrophy type 2F |
c.97C>T | p.Arg33Ter | Pathogenic/Likely pathogenic | ★★☆☆ | SGCD-related disorder |
Evidence stars indicate ClinVar review status. Individual variant interpretation should always be performed by a qualified clinical laboratory - many variants remain classified as Variants of Uncertain Significance (VUS) pending more research.
Associated conditions
Pathogenic variants in the SGCD gene are primarily associated with certain inherited muscle disorders. These include forms of limb-girdle muscular dystrophy, which typically presents with progressive weakness and wasting of muscles closest to the body, such as those in the shoulders and hips. In some cases, SGCD variants have also been identified in individuals with dilated cardiomyopathy, a condition affecting the heart muscle.
No disease links recorded for this gene in our reference set.
Inheritance pattern
Conditions caused by pathogenic SGCD variants typically follow autosomal recessive inheritance.
When both parents are carriers, each child has a 25% chance of being affected, 50% of being a carrier, and 25% of being unaffected.
UK clinical status
The SGCD gene is included in several UK NHS national genomic testing panels. It is listed as 'green' for the Dilated Cardiomyopathy and conduction defects panel, indicating strong evidence for its association with this condition. Similarly, it is 'green' for the Limb girdle muscular dystrophies, myofibrillar myopathies and distal myopathies panel (R82), reflecting its established role in these muscle disorders.
Sources: NHS GMS PanelApp · Genomics England PanelApp · NHS National Genomic Test Directory
Frequently asked questions
What is the function of the SGCD gene?
The SGCD gene provides instructions for making delta-sarcoglycan, a component of the sarcoglycan protein complex. This complex is crucial for maintaining the structural integrity of muscle cells by linking the internal cell structure to the extracellular matrix.
What conditions are associated with variants in the SGCD gene?
Variants in the SGCD gene are primarily associated with certain types of limb-girdle muscular dystrophy. In some individuals, SGCD variants have also been linked to dilated cardiomyopathy, which affects the heart muscle.
How is delta-sarcoglycan related to muscle strength?
Delta-sarcoglycan, as part of the sarcoglycan complex, helps stabilise the dystrophin complex in muscle cell membranes. This complex acts as an anchor, strengthening muscle fibres and protecting them from injury that can occur during muscle contraction and relaxation.
References
- Broglio L, Tentorio M, Cotelli MS. Limb-girdle muscular dystrophy-associated protein diseases. The neurologist. 2010. PMID: 21150381
- Bauer R, Hudson J, Müller HD. Does delta-sarcoglycan-associated autosomal-dominant cardiomyopathy exist? European journal of human genetics : EJHG. 2009. PMID: 19259135
- Sandonà D, Betto R. Sarcoglycanopathies: molecular pathogenesis and therapeutic prospects. Expert reviews in molecular medicine. 2009. PMID: 19781108
- Trabelsi M, Kavian N, Daoud F. Revised spectrum of mutations in sarcoglycanopathies. European journal of human genetics : EJHG. 2008. PMID: 18285821
- Guglieri M, Straub V, Bushby K. Limb-girdle muscular dystrophies. Current opinion in neurology. 2008. PMID: 18769252
- Meena AK, Sreenivas D, Sundaram C. Sarcoglycanopathies: a clinico-pathological study. Neurology India. 2007. PMID: 17558114
- Straub V, Bushby K. The childhood limb-girdle muscular dystrophies. Seminars in pediatric neurology. 2006. PMID: 17027860
- Ozawa E, Mizuno Y, Hagiwara Y. Molecular and cell biology of the sarcoglycan complex. Muscle & nerve. 2005. PMID: 15937871
- Guglieri M, Magri F, Comi GP. Molecular etiopathogenesis of limb girdle muscular and congenital muscular dystrophies: boundaries and contiguities. Clinica chimica acta; international journal of clinical chemistry. 2005. PMID: 16002060
- Hack AA, Groh ME, McNally EM. Sarcoglycans in muscular dystrophy. Microscopy research and technique. 2000. PMID: 10679964
- Tsubata S, Bowles KR, Vatta M. Mutations in the human delta-sarcoglycan gene in familial and sporadic dilated cardiomyopathy. The Journal of clinical investigation. 2000. PMID: 10974018