On this page
ADA2
adenosine deaminase 2
The ADA2 gene provides instructions for producing the adenosine deaminase 2 enzyme, which is involved in immune system regulation and inflammation processes. The ADA2 gene is critical for the production of adenosine deaminase 2, an enzyme found outside cells that helps break down adenosine.
ADA2 is located on the long (q) arm of chromosome 22, at band 22q11.1. Arm ratio per GRCh38 - banding schematic.
Explore chromosome 22 in the library →Available at Jeen Health
Clinical tests that include this
Overview
The ADA2 gene encodes for adenosine deaminase 2, an extracellular enzyme that breaks down adenosine and 2'-deoxyadenosine. Unlike adenosine deaminase 1, which acts inside cells, ADA2 functions in the spaces between cells. Research suggests ADA2 is a growth factor, stimulating cell growth and division, particularly within immune system cells like macrophages.
What the gene does
The adenosine deaminase 2 enzyme, encoded by the ADA2 gene, is primarily involved in breaking down molecules such as adenosine and 2'-deoxyadenosine in the extracellular space. This enzyme is crucial for the proper development and function of immune system cells, including macrophages. Macrophages are a type of white blood cell that are central to the body's inflammatory responses, with some promoting inflammation and others helping to reduce it. The precise mechanisms by which ADA2 influences these processes are still being investigated, but it is understood to be a growth factor that encourages cellular proliferation.
Video: Genetics 101
Chromosome location
The ADA2 gene is located on chromosome 22 at position q11.1. This genomic location specifies its position on the long (q) arm of chromosome 22, within region 1, band 1, sub-band 1.
Protein structure
The adenosine deaminase 2 protein consists of 511 amino acids. It features a Dimerization region spanning amino acids 30-100, which is important for the protein to form its functional dimeric structure. Additionally, a PRB domain is present between amino acids 127-185, though its specific function within the enzyme is still under investigation.
Key variants
Genetic variations within the ADA2 gene can alter the function or production of the adenosine deaminase 2 enzyme. Over 60 different genetic changes, often referred to as mutations, have been identified. These variations can range from single base pair changes to larger deletions or insertions, and they can significantly reduce or eliminate the enzyme's activity.
Sample of pathogenic variants
10 pathogenic / likely-pathogenic variants from ClinVar, ranked by review status (expert-panel-reviewed first). This is a sample; recurrent founder variants in a specific population may not appear here - see the full ClinVar listing via the link above.
| Variant (HGVS) | Protein change | Classification | Evidence | Associated condition |
|---|---|---|---|---|
c.1058_1061del | p.Tyr353fs | Pathogenic/Likely pathogenic | ★★☆☆ | Deficiency of adenosine deaminase 2 |
c.1072G>A | p.Gly358Arg | Pathogenic | ★★☆☆ | not provided |
c.1078A>G | p.Thr360Ala | Pathogenic | ★★☆☆ | Sneddon syndrome |
c.1110C>A | p.Asn370Lys | Pathogenic/Likely pathogenic | ★★☆☆ | Inherited Immunodeficiency Diseases |
c.1147G>A | p.Gly383Ser | Pathogenic/Likely pathogenic | ★★☆☆ | Sneddon syndrome |
c.1303_1319del | p.His434_Pro435insTer | Pathogenic | ★★☆☆ | Deficiency of adenosine deaminase 2 |
c.1358A>G | p.Tyr453Cys | Pathogenic/Likely pathogenic | ★★☆☆ | Deficiency of adenosine deaminase 2 |
c.1373T>A | p.Val458Asp | Pathogenic/Likely pathogenic | ★★☆☆ | Sneddon syndrome |
c.1397_1403del | p.Lys466fs | Pathogenic/Likely pathogenic | ★★☆☆ | Deficiency of adenosine deaminase 2 |
c.139G>A | p.Gly47Arg | Pathogenic/Likely pathogenic | ★★☆☆ | Deficiency of adenosine deaminase 2 |
Evidence stars indicate ClinVar review status. Individual variant interpretation should always be performed by a qualified clinical laboratory - many variants remain classified as Variants of Uncertain Significance (VUS) pending more research.
Associated conditions
Pathogenic variants in the ADA2 gene are associated with deficiency of ADA2 (DADA2). This is an autosomal recessive condition characterised by systemic inflammation affecting various organs and tissues, particularly the blood vessels, leading to vasculitis. The severity of the condition can vary widely among affected individuals.
Inheritance pattern
Conditions caused by pathogenic ADA2 variants typically follow autosomal recessive inheritance.
When both parents are carriers, each child has a 25% chance of being affected, 50% of being a carrier, and 25% of being unaffected.
UK clinical status
The ADA2 gene is included in several NHS Genomic Medicine Service national testing panels in the UK. It is assessed for a range of conditions including autoinflammatory disorders, cytopenias, rare anaemia, and primary immunodeficiency. It is also part of research efforts related to COVID-19 and hereditary neuropathy or pain disorders.
Sources: NHS GMS PanelApp · Genomics England PanelApp · NHS National Genomic Test Directory
Frequently asked questions
What is the function of the ADA2 gene?
The ADA2 gene provides instructions for the adenosine deaminase 2 enzyme, which breaks down adenosine outside cells. This enzyme is important for the growth and development of immune cells, particularly macrophages, and plays a role in the body's inflammatory responses.
What is deficiency of ADA2 (DADA2)?
DADA2 is an autosomal recessive condition caused by mutations in the ADA2 gene. It leads to a lack of functional adenosine deaminase 2 enzyme, resulting in abnormal inflammation that can affect various parts of the body, including blood vessels.
How is the ADA2 gene inherited?
The ADA2 gene is inherited in an autosomal recessive pattern. This means that an individual must inherit two copies of a pathogenic variant, one from each parent, to develop a condition like DADA2. Carriers, with one copy, typically do not show symptoms.
References
- Meyts I, Aksentijevich I. Deficiency of Adenosine Deaminase 2 (DADA2): Updates on the Phenotype, Genetics, Pathogenesis, and Treatment. Journal of clinical immunology. 2018. PMID: 29951947
- Van Montfrans JM, Hartman EA, Braun KP. Phenotypic variability in patients with ADA2 deficiency due to identical homozygous R169Q mutations. Rheumatology (Oxford, England). 2016. PMID: 26867732
- Nanthapisal S, Murphy C, Omoyinmi E. Deficiency of Adenosine Deaminase Type 2: A Description of Phenotype and Genotype in Fifteen Cases. Arthritis & rheumatology (Hoboken, N.J.). 2016. PMID: 27059682
- Zhou Q, Yang D, Ombrello AK. Early-onset stroke and vasculopathy associated with mutations in ADA2. The New England journal of medicine. 2014. PMID: 24552284
- Navon Elkan P, Pierce SB, Segel R. Mutant adenosine deaminase 2 in a polyarteritis nodosa vasculopathy. The New England journal of medicine. 2014. PMID: 24552285
- Zavialov AV, Yu X, Spillmann D. Structural basis for the growth factor activity of human adenosine deaminase ADA2. The Journal of biological chemistry. 2010. PMID: 20147294
- Zavialov AV, Engström A. Human ADA2 belongs to a new family of growth factors with adenosine deaminase activity. The Biochemical journal. 2005. PMID: 15926889